Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp13P33435 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp13P33435 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Mmp13P33435 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.16■□□□□ 0.02
Mmp13P33435 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp13P33435 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Mmp13P33435 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Mmp13P33435 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp13P33435 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.16■□□□□ 0.02
Mmp13P33435 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp13P33435 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Mmp13P33435 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Mmp13P33435 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.15■□□□□ 0.02
Mmp13P33435 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Mmp13P33435 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Mmp13P33435 Gm10499-201ENSMUST00000174094 934 ntBASIC15.15■□□□□ 0.02
Mmp13P33435 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Mmp13P33435 AW822252-206ENSMUST00000208904 237 ntBASIC15.15■□□□□ 0.02
Mmp13P33435 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.15■□□□□ 0.02
Mmp13P33435 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.15■□□□□ 0.02
Mmp13P33435 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Mmp13P33435 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Mmp13P33435 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mmp13P33435 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Mmp13P33435 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Mmp13P33435 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Mmp13P33435 Gm12008-201ENSMUST00000117791 755 ntBASIC15.14■□□□□ 0.01
Mmp13P33435 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.14■□□□□ 0.01
Mmp13P33435 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Mmp13P33435 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp13P33435 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.13■□□□□ 0.01
Mmp13P33435 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.13■□□□□ 0.01
Mmp13P33435 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Mmp13P33435 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Mmp13P33435 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.13■□□□□ 0.01
Mmp13P33435 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.13■□□□□ 0.01
Mmp13P33435 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.13■□□□□ 0.01
Mmp13P33435 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.13■□□□□ 0.01
Mmp13P33435 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.13■□□□□ 0.01
Mmp13P33435 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.13■□□□□ 0.01
Mmp13P33435 Gm37153-201ENSMUST00000193637 231 ntBASIC15.13■□□□□ 0.01
Mmp13P33435 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.13■□□□□ 0.01
Mmp13P33435 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.13■□□□□ 0.01
Mmp13P33435 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp13P33435 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms