Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.34□□□□□ -0.11
Hoxc11P31313 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Hoxc11P31313 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc11P31313 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc11P31313 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc11P31313 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc11P31313 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc11P31313 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc11P31313 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc11P31313 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.34□□□□□ -0.11
Hoxc11P31313 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc11P31313 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc11P31313 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc11P31313 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc11P31313 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc11P31313 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc11P31313 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc11P31313 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxc11P31313 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.33□□□□□ -0.12
Hoxc11P31313 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hoxc11P31313 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc11P31313 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc11P31313 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc11P31313 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc11P31313 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc11P31313 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.33□□□□□ -0.12
Hoxc11P31313 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc11P31313 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hoxc11P31313 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hoxc11P31313 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc11P31313 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.33□□□□□ -0.12
Hoxc11P31313 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxc11P31313 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc11P31313 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.33□□□□□ -0.12
Hoxc11P31313 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc11P31313 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Hoxc11P31313 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc11P31313 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc11P31313 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc11P31313 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc11P31313 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxc11P31313 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc11P31313 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc11P31313 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.32□□□□□ -0.12
Hoxc11P31313 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc11P31313 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Hoxc11P31313 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.32□□□□□ -0.12
Hoxc11P31313 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.32□□□□□ -0.12
Hoxc11P31313 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxc11P31313 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxc11P31313 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.32□□□□□ -0.12
Hoxc11P31313 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc11P31313 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxc11P31313 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hoxc11P31313 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxc11P31313 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxc11P31313 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc11P31313 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 Gm25287-201ENSMUST00000103846 110 ntBASIC14.31□□□□□ -0.12
Hoxc11P31313 Gm22918-201ENSMUST00000103855 110 ntBASIC14.31□□□□□ -0.12
Hoxc11P31313 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hoxc11P31313 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxc11P31313 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxc11P31313 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.31□□□□□ -0.12
Hoxc11P31313 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms