Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.37□□□□□ -0.27
Cd40P27512 Gm2451-201ENSMUST00000199447 999 ntBASIC13.37□□□□□ -0.27
Cd40P27512 Gm10290-201ENSMUST00000200451 999 ntBASIC13.37□□□□□ -0.27
Cd40P27512 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.37□□□□□ -0.27
Cd40P27512 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40P27512 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40P27512 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40P27512 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40P27512 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.37□□□□□ -0.27
Cd40P27512 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40P27512 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40P27512 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40P27512 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40P27512 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40P27512 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40P27512 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cd40P27512 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40P27512 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40P27512 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd40P27512 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Cd40P27512 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Cd40P27512 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cd40P27512 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.36□□□□□ -0.27
Cd40P27512 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.36□□□□□ -0.27
Cd40P27512 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.36□□□□□ -0.27
Cd40P27512 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Cd40P27512 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.36□□□□□ -0.27
Cd40P27512 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Cd40P27512 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.36□□□□□ -0.27
Cd40P27512 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.36□□□□□ -0.27
Cd40P27512 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Cd40P27512 Gm25911-201ENSMUST00000157621 56 ntBASIC13.36□□□□□ -0.27
Cd40P27512 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
Cd40P27512 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.36□□□□□ -0.27
Cd40P27512 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.36□□□□□ -0.27
Cd40P27512 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.36□□□□□ -0.27
Cd40P27512 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cd40P27512 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.36□□□□□ -0.27
Cd40P27512 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.36□□□□□ -0.27
Cd40P27512 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cd40P27512 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Cd40P27512 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd40P27512 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.35□□□□□ -0.27
Cd40P27512 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cd40P27512 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cd40P27512 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.35□□□□□ -0.27
Cd40P27512 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.35□□□□□ -0.27
Cd40P27512 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Gm20553-201ENSMUST00000204205 844 ntBASIC13.35□□□□□ -0.27
Cd40P27512 Olfr286-202ENSMUST00000205305 969 ntBASIC13.35□□□□□ -0.27
Cd40P27512 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cd40P27512 Gm5867-201ENSMUST00000063197 592 ntBASIC13.35□□□□□ -0.27
Cd40P27512 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.35□□□□□ -0.27
Cd40P27512 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cd40P27512 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd40P27512 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms