Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.31□□□□□ -0.12
Fv4P11370 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Fv4P11370 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.31□□□□□ -0.12
Fv4P11370 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.31□□□□□ -0.12
Fv4P11370 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.31□□□□□ -0.12
Fv4P11370 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Fv4P11370 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.31□□□□□ -0.12
Fv4P11370 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Fv4P11370 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Fv4P11370 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Fv4P11370 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Fv4P11370 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Fv4P11370 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Fv4P11370 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Fv4P11370 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Fv4P11370 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Fv4P11370 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.31□□□□□ -0.12
Fv4P11370 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Fv4P11370 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Fv4P11370 Mir8098-201ENSMUST00000184011 137 ntBASIC14.3□□□□□ -0.12
Fv4P11370 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.3□□□□□ -0.12
Fv4P11370 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fv4P11370 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.29□□□□□ -0.12
Fv4P11370 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Gm13036-201ENSMUST00000117799 748 ntBASIC14.29□□□□□ -0.12
Fv4P11370 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.29□□□□□ -0.12
Fv4P11370 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.29□□□□□ -0.12
Fv4P11370 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Fv4P11370 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.29□□□□□ -0.12
Fv4P11370 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Fv4P11370 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Fv4P11370 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Fv4P11370 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fv4P11370 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Fv4P11370 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Fv4P11370 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.28□□□□□ -0.12
Fv4P11370 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.28□□□□□ -0.12
Fv4P11370 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Fv4P11370 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.28□□□□□ -0.12
Fv4P11370 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.28□□□□□ -0.12
Fv4P11370 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Fv4P11370 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms