Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccl3P10855 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Ccl3P10855 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccl3P10855 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Gm6912-201ENSMUST00000117218 544 ntBASIC13.01□□□□□ -0.33
Ccl3P10855 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccl3P10855 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.01□□□□□ -0.33
Ccl3P10855 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccl3P10855 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccl3P10855 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl3P10855 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13□□□□□ -0.33
Ccl3P10855 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Gm15163-201ENSMUST00000120749 1302 ntBASIC13□□□□□ -0.33
Ccl3P10855 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Ccl3P10855 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Gm12091-201ENSMUST00000146791 830 ntBASIC13□□□□□ -0.33
Ccl3P10855 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ccl3P10855 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ccl3P10855 Gm37230-201ENSMUST00000194491 818 ntBASIC13□□□□□ -0.33
Ccl3P10855 Gm43433-201ENSMUST00000196573 481 ntBASIC13□□□□□ -0.33
Ccl3P10855 Gm18018-201ENSMUST00000198273 408 ntBASIC13□□□□□ -0.33
Ccl3P10855 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13□□□□□ -0.33
Ccl3P10855 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ccl3P10855 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ccl3P10855 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ccl3P10855 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Ccl3P10855 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccl3P10855 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ccl3P10855 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ccl3P10855 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ccl3P10855 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccl3P10855 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.99□□□□□ -0.33
Ccl3P10855 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccl3P10855 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.99□□□□□ -0.33
Ccl3P10855 Olfr286-202ENSMUST00000205305 969 ntBASIC12.99□□□□□ -0.33
Ccl3P10855 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.99□□□□□ -0.33
Ccl3P10855 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ccl3P10855 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.99□□□□□ -0.33
Ccl3P10855 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ccl3P10855 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ccl3P10855 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms