Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Gm10275-201ENSMUST00000092620 635 ntBASIC19.06■□□□□ 0.64
Hoxc9P09633 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Hoxc9P09633 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Hoxc9P09633 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.06■□□□□ 0.64
Hoxc9P09633 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc9P09633 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc9P09633 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc9P09633 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc9P09633 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc9P09633 Gm14127-201ENSMUST00000117906 678 ntBASIC19.05■□□□□ 0.64
Hoxc9P09633 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc9P09633 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC19.05■□□□□ 0.64
Hoxc9P09633 Gm9908-201ENSMUST00000211534 448 ntBASIC19.05■□□□□ 0.64
Hoxc9P09633 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc9P09633 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc9P09633 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc9P09633 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Hoxc9P09633 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc9P09633 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc9P09633 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Hoxc9P09633 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc9P09633 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC19.04■□□□□ 0.64
Hoxc9P09633 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc9P09633 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc9P09633 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.04■□□□□ 0.64
Hoxc9P09633 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc9P09633 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc9P09633 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Hoxc9P09633 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.04■□□□□ 0.64
Hoxc9P09633 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc9P09633 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc9P09633 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC19.04■□□□□ 0.64
Hoxc9P09633 Gm28760-201ENSMUST00000185995 736 ntBASIC19.04■□□□□ 0.64
Hoxc9P09633 Gm31326-201ENSMUST00000191856 1048 ntBASIC19.04■□□□□ 0.64
Hoxc9P09633 Gm45059-201ENSMUST00000205558 1077 ntBASIC19.04■□□□□ 0.64
Hoxc9P09633 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc9P09633 Gm15823-201ENSMUST00000064305 670 ntBASIC19.04■□□□□ 0.64
Hoxc9P09633 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Hoxc9P09633 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc9P09633 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC19.04■□□□□ 0.64
Hoxc9P09633 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Hoxc9P09633 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc9P09633 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Gm45667-201ENSMUST00000210380 1316 ntBASIC19.03■□□□□ 0.64
Hoxc9P09633 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC19.03■□□□□ 0.64
Hoxc9P09633 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Hoxc9P09633 Gm37917-201ENSMUST00000194711 392 ntBASIC19.03■□□□□ 0.64
Hoxc9P09633 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC19.03■□□□□ 0.64
Hoxc9P09633 AC121598.1-201ENSMUST00000228224 1019 ntBASIC19.03■□□□□ 0.64
Hoxc9P09633 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC19.03■□□□□ 0.64
Hoxc9P09633 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Hoxc9P09633 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc9P09633 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxc9P09633 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19.02■□□□□ 0.64
Hoxc9P09633 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxc9P09633 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxc9P09633 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxc9P09633 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms