Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Hoxa4P06798 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.54□□□□□ -0.08
Hoxa4P06798 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Hoxa4P06798 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Hoxa4P06798 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Hoxa4P06798 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Hoxa4P06798 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hoxa4P06798 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.53□□□□□ -0.08
Hoxa4P06798 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.53□□□□□ -0.08
Hoxa4P06798 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Hoxa4P06798 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.53□□□□□ -0.08
Hoxa4P06798 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.53□□□□□ -0.08
Hoxa4P06798 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.53□□□□□ -0.08
Hoxa4P06798 Gm37230-201ENSMUST00000194491 818 ntBASIC14.53□□□□□ -0.08
Hoxa4P06798 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.53□□□□□ -0.08
Hoxa4P06798 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.53□□□□□ -0.08
Hoxa4P06798 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
Hoxa4P06798 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxa4P06798 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.52□□□□□ -0.08
Hoxa4P06798 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxa4P06798 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxa4P06798 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxa4P06798 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxa4P06798 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxa4P06798 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxa4P06798 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxa4P06798 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxa4P06798 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxa4P06798 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
Hoxa4P06798 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxa4P06798 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.52□□□□□ -0.09
Hoxa4P06798 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxa4P06798 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.52□□□□□ -0.09
Hoxa4P06798 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxa4P06798 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.52□□□□□ -0.09
Hoxa4P06798 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxa4P06798 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxa4P06798 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxa4P06798 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxa4P06798 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxa4P06798 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.52□□□□□ -0.09
Hoxa4P06798 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxa4P06798 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxa4P06798 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.52□□□□□ -0.09
Hoxa4P06798 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Hoxa4P06798 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxa4P06798 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxa4P06798 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxa4P06798 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxa4P06798 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxa4P06798 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Hoxa4P06798 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Hoxa4P06798 Efs-202ENSMUST00000227037 2540 ntBASIC14.51□□□□□ -0.09
Hoxa4P06798 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxa4P06798 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.51□□□□□ -0.09
Hoxa4P06798 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxa4P06798 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms