Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.01□□□□□ -0.33
P04224 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.01□□□□□ -0.33
P04224 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
P04224 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.01□□□□□ -0.33
P04224 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04224 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04224 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
P04224 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13□□□□□ -0.33
P04224 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13□□□□□ -0.33
P04224 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13□□□□□ -0.33
P04224 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04224 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04224 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13□□□□□ -0.33
P04224 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P04224 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13□□□□□ -0.33
P04224 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13□□□□□ -0.33
P04224 Gm7507-201ENSMUST00000183053 1008 ntBASIC13□□□□□ -0.33
P04224 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13□□□□□ -0.33
P04224 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04224 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
P04224 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13□□□□□ -0.33
P04224 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04224 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04224 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13□□□□□ -0.33
P04224 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04224 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13□□□□□ -0.33
P04224 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P04224 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
P04224 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
P04224 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P04224 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
P04224 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
P04224 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
P04224 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13□□□□□ -0.33
P04224 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P04224 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
P04224 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.99□□□□□ -0.33
P04224 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
P04224 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.99□□□□□ -0.33
P04224 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.99□□□□□ -0.33
P04224 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.99□□□□□ -0.33
P04224 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
P04224 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
P04224 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
P04224 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.99□□□□□ -0.33
P04224 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
P04224 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
P04224 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P04224 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
P04224 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.98□□□□□ -0.33
P04224 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.98□□□□□ -0.33
P04224 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
P04224 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
P04224 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
P04224 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.98□□□□□ -0.33
P04224 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
P04224 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04224 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04224 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04224 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms