Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.41□□□□□ -0.42
Hoxa3P02831 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.41□□□□□ -0.42
Hoxa3P02831 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.41□□□□□ -0.42
Hoxa3P02831 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.41□□□□□ -0.42
Hoxa3P02831 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.41□□□□□ -0.42
Hoxa3P02831 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hoxa3P02831 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxa3P02831 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxa3P02831 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Hoxa3P02831 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxa3P02831 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hoxa3P02831 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Hoxa3P02831 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.4□□□□□ -0.42
Hoxa3P02831 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hoxa3P02831 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.4□□□□□ -0.42
Hoxa3P02831 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.4□□□□□ -0.42
Hoxa3P02831 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.4□□□□□ -0.42
Hoxa3P02831 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.4□□□□□ -0.42
Hoxa3P02831 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.4□□□□□ -0.42
Hoxa3P02831 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hoxa3P02831 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Hoxa3P02831 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.4□□□□□ -0.42
Hoxa3P02831 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hoxa3P02831 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxa3P02831 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Hoxa3P02831 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Hoxa3P02831 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hoxa3P02831 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxa3P02831 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa3P02831 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa3P02831 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa3P02831 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa3P02831 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.39□□□□□ -0.43
Hoxa3P02831 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxa3P02831 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa3P02831 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa3P02831 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxa3P02831 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa3P02831 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Hoxa3P02831 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxa3P02831 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Hoxa3P02831 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa3P02831 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxa3P02831 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa3P02831 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.39□□□□□ -0.43
Hoxa3P02831 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Hoxa3P02831 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hoxa3P02831 Gm18889-201ENSMUST00000174284 929 ntBASIC12.39□□□□□ -0.43
Hoxa3P02831 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxa3P02831 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxa3P02831 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxa3P02831 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.39□□□□□ -0.43
Hoxa3P02831 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxa3P02831 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.39□□□□□ -0.43
Hoxa3P02831 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa3P02831 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa3P02831 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.39□□□□□ -0.43
Hoxa3P02831 Gm10154-201ENSMUST00000084445 354 ntBASIC12.39□□□□□ -0.43
Hoxa3P02831 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxa3P02831 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa3P02831 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa3P02831 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Hoxa3P02831 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa3P02831 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hoxa3P02831 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa3P02831 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hoxa3P02831 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Hoxa3P02831 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.39□□□□□ -0.43
Hoxa3P02831 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms