Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Sh2d1aO88890 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.49□□□□□ -0.73
Sh2d1aO88890 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.48□□□□□ -0.73
Sh2d1aO88890 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Gm7222-201ENSMUST00000117512 906 ntBASIC10.48□□□□□ -0.73
Sh2d1aO88890 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.48□□□□□ -0.73
Sh2d1aO88890 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC10.48□□□□□ -0.73
Sh2d1aO88890 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.48□□□□□ -0.73
Sh2d1aO88890 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sh2d1aO88890 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.47□□□□□ -0.73
Sh2d1aO88890 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sh2d1aO88890 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Gm13884-201ENSMUST00000118103 829 ntBASIC10.47□□□□□ -0.73
Sh2d1aO88890 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.47□□□□□ -0.73
Sh2d1aO88890 Gm6550-201ENSMUST00000187574 993 ntBASIC10.47□□□□□ -0.73
Sh2d1aO88890 Gm28659-201ENSMUST00000188013 759 ntBASIC10.47□□□□□ -0.73
Sh2d1aO88890 Gm37153-201ENSMUST00000193637 231 ntBASIC10.47□□□□□ -0.73
Sh2d1aO88890 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sh2d1aO88890 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms