Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClppO88696 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ClppO88696 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClppO88696 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.47□□□□□ -0.09
ClppO88696 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.47□□□□□ -0.09
ClppO88696 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.47□□□□□ -0.09
ClppO88696 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.47□□□□□ -0.09
ClppO88696 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ClppO88696 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClppO88696 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClppO88696 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.46□□□□□ -0.09
ClppO88696 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ClppO88696 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClppO88696 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
ClppO88696 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClppO88696 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
ClppO88696 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClppO88696 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
ClppO88696 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClppO88696 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ClppO88696 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClppO88696 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ClppO88696 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClppO88696 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ClppO88696 Gm14701-201ENSMUST00000117156 348 ntBASIC14.46□□□□□ -0.09
ClppO88696 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.46□□□□□ -0.09
ClppO88696 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ClppO88696 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.46□□□□□ -0.09
ClppO88696 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.46□□□□□ -0.09
ClppO88696 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.46□□□□□ -0.09
ClppO88696 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.46□□□□□ -0.09
ClppO88696 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.46□□□□□ -0.09
ClppO88696 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.46□□□□□ -0.09
ClppO88696 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClppO88696 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
ClppO88696 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClppO88696 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClppO88696 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ClppO88696 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ClppO88696 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ClppO88696 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ClppO88696 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClppO88696 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ClppO88696 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
ClppO88696 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
ClppO88696 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ClppO88696 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
ClppO88696 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.45□□□□□ -0.1
ClppO88696 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.45□□□□□ -0.1
ClppO88696 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ClppO88696 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClppO88696 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ClppO88696 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClppO88696 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClppO88696 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ClppO88696 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClppO88696 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClppO88696 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ClppO88696 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClppO88696 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.44□□□□□ -0.1
ClppO88696 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClppO88696 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClppO88696 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.44□□□□□ -0.1
ClppO88696 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ClppO88696 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.44□□□□□ -0.1
ClppO88696 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.44□□□□□ -0.1
ClppO88696 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.44□□□□□ -0.1
ClppO88696 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClppO88696 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClppO88696 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClppO88696 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ClppO88696 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ClppO88696 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.44□□□□□ -0.1
ClppO88696 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClppO88696 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClppO88696 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ClppO88696 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
ClppO88696 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms