Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Dnmt3aO88508 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Dnmt3aO88508 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Dnmt3aO88508 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Dnmt3aO88508 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Dnmt3aO88508 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Gm2272-201ENSMUST00000194903 582 ntBASIC14.88□□□□□ -0.03
Dnmt3aO88508 Gm44492-201ENSMUST00000197012 141 ntBASIC14.88□□□□□ -0.03
Dnmt3aO88508 Gm45747-201ENSMUST00000212203 999 ntBASIC14.88□□□□□ -0.03
Dnmt3aO88508 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Gm10175-201ENSMUST00000086013 645 ntBASIC14.88□□□□□ -0.03
Dnmt3aO88508 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.88□□□□□ -0.03
Dnmt3aO88508 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Dnmt3aO88508 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.87□□□□□ -0.03
Dnmt3aO88508 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Gm17271-201ENSMUST00000165535 355 ntBASIC14.87□□□□□ -0.03
Dnmt3aO88508 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Gm43767-201ENSMUST00000198933 381 ntBASIC14.87□□□□□ -0.03
Dnmt3aO88508 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.87□□□□□ -0.03
Dnmt3aO88508 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.87□□□□□ -0.03
Dnmt3aO88508 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3aO88508 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.86□□□□□ -0.03
Dnmt3aO88508 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Gm27301-201ENSMUST00000184012 127 ntBASIC14.86□□□□□ -0.03
Dnmt3aO88508 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3aO88508 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms