Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Gm6222-201ENSMUST00000120787 396 ntBASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Snora78-201ENSMUST00000158630 128 ntBASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Gm27839-201ENSMUST00000184242 106 ntBASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Dancr-204ENSMUST00000132389 2347 ntBASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Tnfrsf17O88472 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.69□□□□□ -0.22
Tnfrsf17O88472 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf17O88472 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Gm12341-201ENSMUST00000119724 503 ntBASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.68□□□□□ -0.22
Tnfrsf17O88472 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.68□□□□□ -0.22
Tnfrsf17O88472 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf17O88472 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf17O88472 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf17O88472 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Tnfrsf17O88472 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Tnfrsf17O88472 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Tnfrsf17O88472 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf17O88472 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf17O88472 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.67□□□□□ -0.22
Tnfrsf17O88472 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.67□□□□□ -0.22
Tnfrsf17O88472 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf17O88472 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf17O88472 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf17O88472 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.67□□□□□ -0.22
Tnfrsf17O88472 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.67□□□□□ -0.22
Tnfrsf17O88472 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.67□□□□□ -0.22
Tnfrsf17O88472 Gm6244-201ENSMUST00000178732 841 ntBASIC13.67□□□□□ -0.22
Tnfrsf17O88472 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms