Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr3O88393 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr3O88393 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr3O88393 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Tgfbr3O88393 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tgfbr3O88393 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tgfbr3O88393 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tgfbr3O88393 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tgfbr3O88393 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tgfbr3O88393 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.02□□□□□ -0.17
Tgfbr3O88393 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.02□□□□□ -0.17
Tgfbr3O88393 Gm16476-201ENSMUST00000221544 139 ntBASIC14.02□□□□□ -0.17
Tgfbr3O88393 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tgfbr3O88393 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Tgfbr3O88393 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tgfbr3O88393 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tgfbr3O88393 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tgfbr3O88393 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tgfbr3O88393 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tgfbr3O88393 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.01□□□□□ -0.17
Tgfbr3O88393 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.01□□□□□ -0.17
Tgfbr3O88393 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Dupd1-202ENSMUST00000224735 548 ntBASIC14.01□□□□□ -0.17
Tgfbr3O88393 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tgfbr3O88393 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14□□□□□ -0.17
Tgfbr3O88393 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tgfbr3O88393 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Tgfbr3O88393 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tgfbr3O88393 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 Gm15653-201ENSMUST00000119247 907 ntBASIC14□□□□□ -0.17
Tgfbr3O88393 Gm13464-201ENSMUST00000119418 935 ntBASIC14□□□□□ -0.17
Tgfbr3O88393 Gm6222-201ENSMUST00000120787 396 ntBASIC14□□□□□ -0.17
Tgfbr3O88393 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14□□□□□ -0.17
Tgfbr3O88393 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14□□□□□ -0.17
Tgfbr3O88393 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14□□□□□ -0.17
Tgfbr3O88393 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14□□□□□ -0.17
Tgfbr3O88393 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14□□□□□ -0.17
Tgfbr3O88393 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tgfbr3O88393 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tgfbr3O88393 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14□□□□□ -0.17
Tgfbr3O88393 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Tgfbr3O88393 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tgfbr3O88393 Gm27631-201ENSMUST00000184163 466 ntBASIC13.99□□□□□ -0.17
Tgfbr3O88393 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms