Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Cxcl13O55038 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Gm8749-201ENSMUST00000117737 331 ntBASIC12.49□□□□□ -0.41
Cxcl13O55038 Gm13223-201ENSMUST00000118609 747 ntBASIC12.49□□□□□ -0.41
Cxcl13O55038 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Gm25144-201ENSMUST00000179561 110 ntBASIC12.49□□□□□ -0.41
Cxcl13O55038 Gm25352-201ENSMUST00000179815 110 ntBASIC12.49□□□□□ -0.41
Cxcl13O55038 Gm7063-201ENSMUST00000186840 981 ntBASIC12.49□□□□□ -0.41
Cxcl13O55038 Gm28630-201ENSMUST00000187806 498 ntBASIC12.49□□□□□ -0.41
Cxcl13O55038 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.49□□□□□ -0.41
Cxcl13O55038 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Cxcl13O55038 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl13O55038 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Cxcl13O55038 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.48□□□□□ -0.41
Cxcl13O55038 Gm13453-201ENSMUST00000118708 357 ntBASIC12.48□□□□□ -0.41
Cxcl13O55038 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.48□□□□□ -0.41
Cxcl13O55038 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Gm38294-201ENSMUST00000192831 381 ntBASIC12.48□□□□□ -0.41
Cxcl13O55038 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.48□□□□□ -0.41
Cxcl13O55038 Gm6888-201ENSMUST00000221983 706 ntBASIC12.48□□□□□ -0.41
Cxcl13O55038 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.48□□□□□ -0.41
Cxcl13O55038 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
Cxcl13O55038 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl13O55038 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cxcl13O55038 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Cxcl13O55038 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.47□□□□□ -0.41
Cxcl13O55038 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Gm13823-201ENSMUST00000119930 345 ntBASIC12.47□□□□□ -0.41
Cxcl13O55038 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Cxcl13O55038 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.47□□□□□ -0.41
Cxcl13O55038 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Cxcl13O55038 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.47□□□□□ -0.41
Cxcl13O55038 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cxcl13O55038 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.47□□□□□ -0.41
Cxcl13O55038 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl13O55038 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.47□□□□□ -0.41
Cxcl13O55038 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.47□□□□□ -0.41
Cxcl13O55038 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cxcl13O55038 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cxcl13O55038 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms