Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DffbO54788 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
DffbO54788 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DffbO54788 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
DffbO54788 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
DffbO54788 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
DffbO54788 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
DffbO54788 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DffbO54788 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DffbO54788 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
DffbO54788 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
DffbO54788 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
DffbO54788 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DffbO54788 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
DffbO54788 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DffbO54788 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.73□□□□□ -0.37
DffbO54788 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DffbO54788 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DffbO54788 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DffbO54788 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
DffbO54788 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DffbO54788 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.72□□□□□ -0.37
DffbO54788 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
DffbO54788 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
DffbO54788 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
DffbO54788 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
DffbO54788 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.72□□□□□ -0.37
DffbO54788 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
DffbO54788 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
DffbO54788 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.72□□□□□ -0.37
DffbO54788 Gm6296-201ENSMUST00000222599 943 ntBASIC12.72□□□□□ -0.37
DffbO54788 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
DffbO54788 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.72□□□□□ -0.37
DffbO54788 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
DffbO54788 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.72□□□□□ -0.37
DffbO54788 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
DffbO54788 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DffbO54788 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.71□□□□□ -0.37
DffbO54788 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
DffbO54788 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.71□□□□□ -0.37
DffbO54788 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
DffbO54788 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
DffbO54788 Gm23547-201ENSMUST00000158210 271 ntBASIC12.71□□□□□ -0.37
DffbO54788 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.71□□□□□ -0.37
DffbO54788 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.71□□□□□ -0.37
DffbO54788 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
DffbO54788 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
DffbO54788 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
DffbO54788 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
DffbO54788 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
DffbO54788 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DffbO54788 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DffbO54788 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms