Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Limk2O54785 Rprl2-201ENSMUST00000157150 290 ntBASIC14.99□□□□□ -0.01
Limk2O54785 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.99□□□□□ -0.01
Limk2O54785 Mir6990-201ENSMUST00000183724 91 ntBASIC14.99□□□□□ -0.01
Limk2O54785 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.99□□□□□ -0.01
Limk2O54785 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.99□□□□□ -0.01
Limk2O54785 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Limk2O54785 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Limk2O54785 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limk2O54785 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Limk2O54785 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
Limk2O54785 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.98□□□□□ -0.01
Limk2O54785 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.98□□□□□ -0.01
Limk2O54785 Gm5186-201ENSMUST00000218781 920 ntBASIC14.98□□□□□ -0.01
Limk2O54785 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.98□□□□□ -0.01
Limk2O54785 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.98□□□□□ -0.01
Limk2O54785 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
Limk2O54785 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Limk2O54785 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.98□□□□□ -0.01
Limk2O54785 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Limk2O54785 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limk2O54785 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.97□□□□□ -0.01
Limk2O54785 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.97□□□□□ -0.01
Limk2O54785 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Limk2O54785 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Limk2O54785 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Limk2O54785 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.97□□□□□ -0.01
Limk2O54785 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Limk2O54785 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Limk2O54785 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.97□□□□□ -0.01
Limk2O54785 Gm20949-201ENSMUST00000206478 952 ntBASIC14.97□□□□□ -0.01
Limk2O54785 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.97□□□□□ -0.01
Limk2O54785 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.97□□□□□ -0.01
Limk2O54785 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.97□□□□□ -0.01
Limk2O54785 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Limk2O54785 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.97□□□□□ -0.01
Limk2O54785 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.97□□□□□ -0.01
Limk2O54785 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limk2O54785 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Limk2O54785 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Limk2O54785 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Limk2O54785 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Limk2O54785 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms