Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.22■□□□□ 0.19
Sptlc1O35704 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Sptlc1O35704 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.22■□□□□ 0.19
Sptlc1O35704 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.22■□□□□ 0.19
Sptlc1O35704 Gm5479-201ENSMUST00000160578 435 ntBASIC16.22■□□□□ 0.19
Sptlc1O35704 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Sptlc1O35704 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.22■□□□□ 0.19
Sptlc1O35704 Gm9063-201ENSMUST00000223299 582 ntBASIC16.22■□□□□ 0.19
Sptlc1O35704 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Sptlc1O35704 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Sptlc1O35704 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.22■□□□□ 0.19
Sptlc1O35704 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sptlc1O35704 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Sptlc1O35704 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Sptlc1O35704 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Sptlc1O35704 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sptlc1O35704 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sptlc1O35704 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sptlc1O35704 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sptlc1O35704 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Sptlc1O35704 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sptlc1O35704 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sptlc1O35704 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sptlc1O35704 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sptlc1O35704 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Sptlc1O35704 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.21■□□□□ 0.19
Sptlc1O35704 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.21■□□□□ 0.19
Sptlc1O35704 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC16.21■□□□□ 0.19
Sptlc1O35704 Gm27533-201ENSMUST00000183800 152 ntBASIC16.21■□□□□ 0.19
Sptlc1O35704 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sptlc1O35704 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
Sptlc1O35704 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sptlc1O35704 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sptlc1O35704 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.21■□□□□ 0.19
Sptlc1O35704 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sptlc1O35704 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sptlc1O35704 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Sptlc1O35704 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Sptlc1O35704 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Sptlc1O35704 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sptlc1O35704 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sptlc1O35704 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.2■□□□□ 0.18
Sptlc1O35704 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Sptlc1O35704 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.2■□□□□ 0.18
Sptlc1O35704 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.2■□□□□ 0.18
Sptlc1O35704 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 Mir7684-201ENSMUST00000183858 60 ntBASIC16.2■□□□□ 0.18
Sptlc1O35704 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.2■□□□□ 0.18
Sptlc1O35704 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.2■□□□□ 0.18
Sptlc1O35704 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.2■□□□□ 0.18
Sptlc1O35704 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Sptlc1O35704 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sptlc1O35704 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptlc1O35704 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.19■□□□□ 0.18
Sptlc1O35704 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sptlc1O35704 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.19■□□□□ 0.18
Sptlc1O35704 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptlc1O35704 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms