Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Stx1aO35526 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.64■□□□□ 0.25
Stx1aO35526 Gm7284-201ENSMUST00000131667 944 ntBASIC16.64■□□□□ 0.25
Stx1aO35526 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 Gm11780-201ENSMUST00000136880 516 ntBASIC16.64■□□□□ 0.25
Stx1aO35526 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.64■□□□□ 0.25
Stx1aO35526 Gm18489-201ENSMUST00000172565 551 ntBASIC16.64■□□□□ 0.25
Stx1aO35526 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.64■□□□□ 0.25
Stx1aO35526 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Stx1aO35526 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.64■□□□□ 0.25
Stx1aO35526 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Stx1aO35526 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.64■□□□□ 0.25
Stx1aO35526 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Stx1aO35526 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Stx1aO35526 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Stx1aO35526 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.63■□□□□ 0.25
Stx1aO35526 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
Stx1aO35526 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.63■□□□□ 0.25
Stx1aO35526 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Stx1aO35526 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Stx1aO35526 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Stx1aO35526 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Stx1aO35526 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Stx1aO35526 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Stx1aO35526 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.61■□□□□ 0.25
Stx1aO35526 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.61■□□□□ 0.25
Stx1aO35526 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.61■□□□□ 0.25
Stx1aO35526 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Stx1aO35526 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.61■□□□□ 0.25
Stx1aO35526 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.61■□□□□ 0.25
Stx1aO35526 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.61■□□□□ 0.25
Stx1aO35526 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.61■□□□□ 0.25
Stx1aO35526 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.61■□□□□ 0.25
Stx1aO35526 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Stx1aO35526 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Stx1aO35526 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms