Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.1□□□□□ -0.15
Clk3O35492 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.1□□□□□ -0.15
Clk3O35492 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Clk3O35492 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Clk3O35492 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.1□□□□□ -0.15
Clk3O35492 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Gm6550-201ENSMUST00000187574 993 ntBASIC14.1□□□□□ -0.15
Clk3O35492 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.1□□□□□ -0.15
Clk3O35492 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.1□□□□□ -0.15
Clk3O35492 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.1□□□□□ -0.15
Clk3O35492 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.1□□□□□ -0.15
Clk3O35492 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Clk3O35492 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clk3O35492 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Clk3O35492 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Clk3O35492 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Clk3O35492 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clk3O35492 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Clk3O35492 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.09□□□□□ -0.15
Clk3O35492 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.09□□□□□ -0.15
Clk3O35492 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
Clk3O35492 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Clk3O35492 Gm7787-201ENSMUST00000216858 688 ntBASIC14.09□□□□□ -0.15
Clk3O35492 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Clk3O35492 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Clk3O35492 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.09□□□□□ -0.15
Clk3O35492 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Clk3O35492 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Clk3O35492 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Clk3O35492 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.09□□□□□ -0.15
Clk3O35492 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clk3O35492 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clk3O35492 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clk3O35492 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Clk3O35492 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clk3O35492 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clk3O35492 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk3O35492 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk3O35492 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clk3O35492 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Clk3O35492 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk3O35492 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.08□□□□□ -0.16
Clk3O35492 Gm37153-201ENSMUST00000193637 231 ntBASIC14.08□□□□□ -0.16
Clk3O35492 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.08□□□□□ -0.16
Clk3O35492 AV026068-213ENSMUST00000223675 1171 ntBASIC14.08□□□□□ -0.16
Clk3O35492 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.08□□□□□ -0.16
Clk3O35492 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk3O35492 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk3O35492 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk3O35492 Gm7461-201ENSMUST00000058918 827 ntBASIC14.08□□□□□ -0.16
Clk3O35492 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk3O35492 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk3O35492 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clk3O35492 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Clk3O35492 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk3O35492 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clk3O35492 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clk3O35492 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clk3O35492 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Clk3O35492 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms