Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Dctn1O08788 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Dctn1O08788 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Dctn1O08788 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.19■□□□□ 0.5
Dctn1O08788 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Dctn1O08788 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Dctn1O08788 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
Dctn1O08788 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Dctn1O08788 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Dctn1O08788 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Dctn1O08788 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Dctn1O08788 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Dctn1O08788 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Dctn1O08788 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.18■□□□□ 0.5
Dctn1O08788 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Dctn1O08788 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.18■□□□□ 0.5
Dctn1O08788 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Dctn1O08788 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Dctn1O08788 Gm4875-201ENSMUST00000118257 786 ntBASIC18.18■□□□□ 0.5
Dctn1O08788 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Dctn1O08788 Gm16476-201ENSMUST00000221544 139 ntBASIC18.18■□□□□ 0.5
Dctn1O08788 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Dctn1O08788 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Dctn1O08788 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Dctn1O08788 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.18■□□□□ 0.5
Dctn1O08788 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Dctn1O08788 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Dctn1O08788 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Dctn1O08788 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Dctn1O08788 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Dctn1O08788 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Dctn1O08788 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Dctn1O08788 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Dctn1O08788 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Dctn1O08788 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Dctn1O08788 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Dctn1O08788 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Dctn1O08788 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Dctn1O08788 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Dctn1O08788 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Dctn1O08788 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Dctn1O08788 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Dctn1O08788 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Dctn1O08788 Gm12490-201ENSMUST00000120255 560 ntBASIC18.17■□□□□ 0.5
Dctn1O08788 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.17■□□□□ 0.5
Dctn1O08788 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC18.17■□□□□ 0.5
Dctn1O08788 Dupd1-202ENSMUST00000224735 548 ntBASIC18.17■□□□□ 0.5
Dctn1O08788 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC18.17■□□□□ 0.5
Dctn1O08788 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Dctn1O08788 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Dctn1O08788 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Dctn1O08788 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Dctn1O08788 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC18.16■□□□□ 0.5
Dctn1O08788 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.16■□□□□ 0.5
Dctn1O08788 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.16■□□□□ 0.5
Dctn1O08788 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Dctn1O08788 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Dctn1O08788 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Dctn1O08788 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC18.16■□□□□ 0.5
Dctn1O08788 Gm27631-201ENSMUST00000184163 466 ntBASIC18.16■□□□□ 0.5
Dctn1O08788 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.16■□□□□ 0.5
Dctn1O08788 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.16■□□□□ 0.5
Dctn1O08788 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Dctn1O08788 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.16■□□□□ 0.5
Dctn1O08788 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Dctn1O08788 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.16■□□□□ 0.5
Dctn1O08788 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.16■□□□□ 0.5
Dctn1O08788 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Dctn1O08788 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Dctn1O08788 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Dctn1O08788 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Dctn1O08788 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Dctn1O08788 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Dctn1O08788 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dctn1O08788 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Dctn1O08788 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms