Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1bO08603 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Raet1bO08603 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1bO08603 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1bO08603 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.11□□□□□ -0.31
Raet1bO08603 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Raet1bO08603 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1bO08603 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1bO08603 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1bO08603 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1bO08603 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1bO08603 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Raet1bO08603 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.11□□□□□ -0.31
Raet1bO08603 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1bO08603 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1bO08603 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Raet1bO08603 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Raet1bO08603 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.1□□□□□ -0.31
Raet1bO08603 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.1□□□□□ -0.31
Raet1bO08603 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Raet1bO08603 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.1□□□□□ -0.31
Raet1bO08603 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Raet1bO08603 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Raet1bO08603 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Gm2272-201ENSMUST00000194903 582 ntBASIC13.1□□□□□ -0.31
Raet1bO08603 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.1□□□□□ -0.31
Raet1bO08603 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Raet1bO08603 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.1□□□□□ -0.31
Raet1bO08603 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.1□□□□□ -0.31
Raet1bO08603 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.1□□□□□ -0.31
Raet1bO08603 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.1□□□□□ -0.31
Raet1bO08603 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Raet1bO08603 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.1□□□□□ -0.31
Raet1bO08603 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Raet1bO08603 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Raet1bO08603 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Raet1bO08603 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Raet1bO08603 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.1□□□□□ -0.31
Raet1bO08603 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Raet1bO08603 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Raet1bO08603 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Raet1bO08603 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Raet1bO08603 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.09□□□□□ -0.31
Raet1bO08603 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.09□□□□□ -0.31
Raet1bO08603 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.09□□□□□ -0.31
Raet1bO08603 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.09□□□□□ -0.31
Raet1bO08603 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Raet1bO08603 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.09□□□□□ -0.31
Raet1bO08603 Gm5364-201ENSMUST00000216789 889 ntBASIC13.09□□□□□ -0.31
Raet1bO08603 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.09□□□□□ -0.31
Raet1bO08603 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Raet1bO08603 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.09□□□□□ -0.31
Raet1bO08603 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Raet1bO08603 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Raet1bO08603 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Raet1bO08603 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Raet1bO08603 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Raet1bO08603 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Raet1bO08603 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms