Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
AlyrefO08583 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 Gm12176-201ENSMUST00000121420 875 ntBASIC14.97□□□□□ -0.01
AlyrefO08583 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.97□□□□□ -0.01
AlyrefO08583 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.97□□□□□ -0.01
AlyrefO08583 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.97□□□□□ -0.01
AlyrefO08583 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.97□□□□□ -0.01
AlyrefO08583 Gm37714-201ENSMUST00000194742 342 ntBASIC14.97□□□□□ -0.01
AlyrefO08583 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.97□□□□□ -0.01
AlyrefO08583 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.97□□□□□ -0.01
AlyrefO08583 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
AlyrefO08583 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AlyrefO08583 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
AlyrefO08583 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
AlyrefO08583 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
AlyrefO08583 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.96□□□□□ -0.01
AlyrefO08583 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.96□□□□□ -0.01
AlyrefO08583 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
AlyrefO08583 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.96□□□□□ -0.01
AlyrefO08583 Mir6392-201ENSMUST00000184924 108 ntBASIC14.96□□□□□ -0.01
AlyrefO08583 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Gm18624-201ENSMUST00000220966 658 ntBASIC14.96□□□□□ -0.01
AlyrefO08583 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.96□□□□□ -0.01
AlyrefO08583 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
AlyrefO08583 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.96□□□□□ -0.01
AlyrefO08583 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AlyrefO08583 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AlyrefO08583 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AlyrefO08583 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
AlyrefO08583 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
AlyrefO08583 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
AlyrefO08583 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
AlyrefO08583 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AlyrefO08583 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AlyrefO08583 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
AlyrefO08583 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AlyrefO08583 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
AlyrefO08583 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.95□□□□□ -0.02
AlyrefO08583 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
AlyrefO08583 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.95□□□□□ -0.02
AlyrefO08583 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.95□□□□□ -0.02
AlyrefO08583 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
AlyrefO08583 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
AlyrefO08583 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
AlyrefO08583 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
AlyrefO08583 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms