Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm3139J3QK78 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Gm3139J3QK78 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm3139J3QK78 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm3139J3QK78 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm3139J3QK78 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Gm3139J3QK78 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Gm3139J3QK78 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Mir449b-201ENSMUST00000104833 80 ntBASIC14.73□□□□□ -0.05
Gm3139J3QK78 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Gm9726-201ENSMUST00000180321 678 ntBASIC14.73□□□□□ -0.05
Gm3139J3QK78 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.73□□□□□ -0.05
Gm3139J3QK78 Gm10253-201ENSMUST00000194270 940 ntBASIC14.73□□□□□ -0.05
Gm3139J3QK78 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.73□□□□□ -0.05
Gm3139J3QK78 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Gm3139J3QK78 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.73□□□□□ -0.05
Gm3139J3QK78 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.73□□□□□ -0.05
Gm3139J3QK78 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3139J3QK78 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Gm7774-201ENSMUST00000200064 533 ntBASIC14.72□□□□□ -0.05
Gm3139J3QK78 Gm45098-201ENSMUST00000207179 657 ntBASIC14.72□□□□□ -0.05
Gm3139J3QK78 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.72□□□□□ -0.05
Gm3139J3QK78 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Gm3139J3QK78 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Gm9824-201ENSMUST00000178707 561 ntBASIC14.71□□□□□ -0.05
Gm3139J3QK78 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.71□□□□□ -0.05
Gm3139J3QK78 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Gm2451-201ENSMUST00000199447 999 ntBASIC14.71□□□□□ -0.05
Gm3139J3QK78 Gm10290-201ENSMUST00000200451 999 ntBASIC14.71□□□□□ -0.05
Gm3139J3QK78 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Gm3139J3QK78 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms