Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Colca2F8VPY8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Colca2F8VPY8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.89□□□□□ -0.19
Colca2F8VPY8 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.89□□□□□ -0.19
Colca2F8VPY8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Colca2F8VPY8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Colca2F8VPY8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Colca2F8VPY8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Colca2F8VPY8 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Gm13392-201ENSMUST00000117708 150 ntBASIC13.88□□□□□ -0.19
Colca2F8VPY8 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Snora78-201ENSMUST00000158630 128 ntBASIC13.88□□□□□ -0.19
Colca2F8VPY8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.88□□□□□ -0.19
Colca2F8VPY8 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.88□□□□□ -0.19
Colca2F8VPY8 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Colca2F8VPY8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Colca2F8VPY8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Colca2F8VPY8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.87□□□□□ -0.19
Colca2F8VPY8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.87□□□□□ -0.19
Colca2F8VPY8 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Gm45784-201ENSMUST00000188360 142 ntBASIC13.87□□□□□ -0.19
Colca2F8VPY8 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 App-207ENSMUST00000227737 2827 ntBASIC13.87□□□□□ -0.19
Colca2F8VPY8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.87□□□□□ -0.19
Colca2F8VPY8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Colca2F8VPY8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Colca2F8VPY8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Colca2F8VPY8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Colca2F8VPY8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Colca2F8VPY8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Colca2F8VPY8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Colca2F8VPY8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Colca2F8VPY8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Colca2F8VPY8 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.86□□□□□ -0.19
Colca2F8VPY8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Colca2F8VPY8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Colca2F8VPY8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Colca2F8VPY8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Colca2F8VPY8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Colca2F8VPY8 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Colca2F8VPY8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Colca2F8VPY8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.86□□□□□ -0.19
Colca2F8VPY8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Colca2F8VPY8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Colca2F8VPY8 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Colca2F8VPY8 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Colca2F8VPY8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Colca2F8VPY8 Gm27486-201ENSMUST00000184923 80 ntBASIC13.86□□□□□ -0.19
Colca2F8VPY8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms