Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Gm10542F6XDR3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Gm15165-201ENSMUST00000118140 502 ntBASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Gm8318-201ENSMUST00000182954 872 ntBASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10542F6XDR3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Gm23547-201ENSMUST00000158210 271 ntBASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Acot6-202ENSMUST00000222921 3622 ntBASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Gm10542F6XDR3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm10542F6XDR3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm10542F6XDR3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Gm10542F6XDR3 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.28□□□□□ -0.76
Gm10542F6XDR3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm10542F6XDR3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC10.28□□□□□ -0.76
Gm10542F6XDR3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.28□□□□□ -0.76
Gm10542F6XDR3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Gm10542F6XDR3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm10542F6XDR3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Gm10542F6XDR3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms