Protein–RNA interactions for Protein: B3F5L4

5830411N06Rik, RIKEN cDNA 5830411N06 gene, mousemouse

Predictions only

Length 1,112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5830411N06RikB3F5L4 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Gm27430-201ENSMUST00000184585 107 ntBASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Gm44333-201ENSMUST00000197168 107 ntBASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
5830411N06RikB3F5L4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Efs-202ENSMUST00000227037 2540 ntBASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.12■□□□□ 0.01
5830411N06RikB3F5L4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Gm6415-201ENSMUST00000118488 348 ntBASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Gm22175-201ENSMUST00000175007 78 ntBASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Mir6956-201ENSMUST00000183598 62 ntBASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Gm18766-201ENSMUST00000189811 808 ntBASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
5830411N06RikB3F5L4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5830411N06RikB3F5L4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms