Protein–RNA interactions for Protein: A8DUK4

Hbb-bs, Beta-globin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-bsA8DUK4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Gm5874-201ENSMUST00000096101 508 ntBASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Hbb-bsA8DUK4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.43□□□□□ -0.74
Hbb-bsA8DUK4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Gm13148-201ENSMUST00000118892 745 ntBASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 AC122769.4-201ENSMUST00000228166 901 ntBASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hbb-bsA8DUK4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms