Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm44357-201ENSMUST00000195897 142 ntBASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm19658-201ENSMUST00000196231 138 ntBASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm44367-201ENSMUST00000196836 138 ntBASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm44350-201ENSMUST00000197197 138 ntBASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm44390-201ENSMUST00000197533 144 ntBASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm44313-201ENSMUST00000198018 138 ntBASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm44486-201ENSMUST00000198508 138 ntBASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm44314-201ENSMUST00000199263 138 ntBASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm44394-201ENSMUST00000199558 138 ntBASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm44484-201ENSMUST00000199873 138 ntBASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm44466-201ENSMUST00000200264 138 ntBASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm44359-201ENSMUST00000200671 138 ntBASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm7787-201ENSMUST00000216858 688 ntBASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Trav12-1A0N8R1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trav12-1A0N8R1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms