Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav6d-5A0A075B6B9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6d-5A0A075B6B9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav6d-5A0A075B6B9 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms