Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5-4A0A075B652 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav5-4A0A075B652 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Gm18489-201ENSMUST00000172565 551 ntBASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5-4A0A075B652 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Gm37153-201ENSMUST00000193637 231 ntBASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav5-4A0A075B652 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Gm7222-201ENSMUST00000117512 906 ntBASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Gm15173-201ENSMUST00000122049 433 ntBASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Trav5-4A0A075B652 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms