Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Gm13168-201ENSMUST00000121771 632 ntBASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Gm7367-201ENSMUST00000057611 492 ntBASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav8-1A0A075B641 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Gm715-201ENSMUST00000117865 831 ntBASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Gm11336-201ENSMUST00000118168 334 ntBASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Gm6257-201ENSMUST00000163864 910 ntBASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 AC166574.6-201ENSMUST00000227889 1806 ntBASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav8-1A0A075B641 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav8-1A0A075B641 Slc35b2-207ENSMUST00000226086 850 ntBASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms