Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav16d-dv11A0A075B617 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm27389-201ENSMUST00000183622 195 ntBASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Matn2-206ENSMUST00000228570 2798 ntBASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav16d-dv11A0A075B617 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm12500-202ENSMUST00000186471 2428 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Celf4-206ENSMUST00000224553 1729 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm4609-201ENSMUST00000106443 1002 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm5138-201ENSMUST00000113842 1002 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm15191-201ENSMUST00000117933 1000 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm12182-201ENSMUST00000118655 1008 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm13882-201ENSMUST00000120886 1002 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm10284-201ENSMUST00000145057 1005 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm10481-201ENSMUST00000179228 1002 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm2574-201ENSMUST00000181051 1002 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm3200-201ENSMUST00000181493 1002 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm8825-201ENSMUST00000182565 998 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm4518-201ENSMUST00000182638 718 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm8330-201ENSMUST00000182754 1008 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm4575-201ENSMUST00000182991 1002 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm8709-201ENSMUST00000183230 1012 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm19164-201ENSMUST00000210667 640 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm30025-201ENSMUST00000218555 728 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm10293-201ENSMUST00000076317 1002 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm6316-201ENSMUST00000082064 1020 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Zkscan4-202ENSMUST00000225845 1506 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav16d-dv11A0A075B617 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms