Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 CT009713.7-201ENSMUST00000224689 571 ntBASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Timm23-208ENSMUST00000226683 750 ntBASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav4n-4A0A075B615 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Gm10313-201ENSMUST00000095320 1002 ntBASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.24□□□□□ -0.77
Trav4n-4A0A075B615 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Gm15378-201ENSMUST00000121894 207 ntBASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Gm5874-201ENSMUST00000096101 508 ntBASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav4n-4A0A075B615 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms