Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Phf1Q9Z1B8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Gm15427-201ENSMUST00000117288 531 ntBASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Phf1Q9Z1B8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Gm7063-201ENSMUST00000186840 981 ntBASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Thap2-203ENSMUST00000218989 527 ntBASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Phf1Q9Z1B8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Gm12008-201ENSMUST00000117791 755 ntBASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Gm15920-201ENSMUST00000118998 402 ntBASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Gm27301-201ENSMUST00000184012 127 ntBASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Gm20553-201ENSMUST00000204205 844 ntBASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Gm45612-201ENSMUST00000211320 160 ntBASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.63□□□□□ -0.23
Phf1Q9Z1B8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Phf1Q9Z1B8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.62□□□□□ -0.23
Phf1Q9Z1B8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms