Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
ClcnkaQ9WUB7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Gm1401-201ENSMUST00000122048 772 ntBASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.65□□□□□ -0.22
ClcnkaQ9WUB7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
ClcnkaQ9WUB7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
ClcnkaQ9WUB7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Gm14140-201ENSMUST00000119999 995 ntBASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Psmb5-202ENSMUST00000227257 622 ntBASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ClcnkaQ9WUB7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.63□□□□□ -0.23
ClcnkaQ9WUB7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms