Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Gm15173-201ENSMUST00000122049 433 ntBASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Gm18489-201ENSMUST00000172565 551 ntBASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Gm18733-201ENSMUST00000173950 856 ntBASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Gm37153-201ENSMUST00000193637 231 ntBASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 AV026068-213ENSMUST00000223675 1171 ntBASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RpgrQ9R0X5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.08■□□□□ 0.01
RpgrQ9R0X5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.08■□□□□ 0.01
RpgrQ9R0X5 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RpgrQ9R0X5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
RpgrQ9R0X5 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RpgrQ9R0X5 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RpgrQ9R0X5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RpgrQ9R0X5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RpgrQ9R0X5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RpgrQ9R0X5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RpgrQ9R0X5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
RpgrQ9R0X5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RpgrQ9R0X5 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
RpgrQ9R0X5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RpgrQ9R0X5 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.08■□□□□ 0
RpgrQ9R0X5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.08■□□□□ 0
RpgrQ9R0X5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.08■□□□□ 0
RpgrQ9R0X5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.08■□□□□ 0
RpgrQ9R0X5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RpgrQ9R0X5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
RpgrQ9R0X5 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RpgrQ9R0X5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RpgrQ9R0X5 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RpgrQ9R0X5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.08■□□□□ 0
RpgrQ9R0X5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RpgrQ9R0X5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.07■□□□□ 0
RpgrQ9R0X5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
RpgrQ9R0X5 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.07■□□□□ 0
RpgrQ9R0X5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.07■□□□□ 0
RpgrQ9R0X5 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.07■□□□□ 0
RpgrQ9R0X5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
RpgrQ9R0X5 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.07■□□□□ 0
RpgrQ9R0X5 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RpgrQ9R0X5 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.07■□□□□ 0
RpgrQ9R0X5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.07■□□□□ 0
RpgrQ9R0X5 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.06■□□□□ 0
RpgrQ9R0X5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RpgrQ9R0X5 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RpgrQ9R0X5 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RpgrQ9R0X5 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.06■□□□□ 0
RpgrQ9R0X5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.06■□□□□ 0
RpgrQ9R0X5 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RpgrQ9R0X5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RpgrQ9R0X5 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.06■□□□□ 0
RpgrQ9R0X5 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.06■□□□□ 0
RpgrQ9R0X5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.06■□□□□ 0
RpgrQ9R0X5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RpgrQ9R0X5 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.06■□□□□ 0
RpgrQ9R0X5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.06■□□□□ 0
RpgrQ9R0X5 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.06■□□□□ 0
RpgrQ9R0X5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.06■□□□□ 0
RpgrQ9R0X5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.06■□□□□ 0
RpgrQ9R0X5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
RpgrQ9R0X5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RpgrQ9R0X5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms