Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps29Q9QZ88 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.19□□□□□ -0.14
Vps29Q9QZ88 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Gm12008-201ENSMUST00000117791 755 ntBASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps29Q9QZ88 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.18□□□□□ -0.14
Vps29Q9QZ88 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.18□□□□□ -0.14
Vps29Q9QZ88 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Gm12350-201ENSMUST00000121208 462 ntBASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.18□□□□□ -0.14
Vps29Q9QZ88 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.17□□□□□ -0.14
Vps29Q9QZ88 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps29Q9QZ88 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms