Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.75■□□□□ 0.27
Nr2e3Q9QXZ7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.75■□□□□ 0.27
Nr2e3Q9QXZ7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Nr2e3Q9QXZ7 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr2e3Q9QXZ7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.75■□□□□ 0.27
Nr2e3Q9QXZ7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.75■□□□□ 0.27
Nr2e3Q9QXZ7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Nr2e3Q9QXZ7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr2e3Q9QXZ7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr2e3Q9QXZ7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr2e3Q9QXZ7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr2e3Q9QXZ7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr2e3Q9QXZ7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr2e3Q9QXZ7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nr2e3Q9QXZ7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nr2e3Q9QXZ7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nr2e3Q9QXZ7 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Gm27702-201ENSMUST00000184512 56 ntBASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Gm27494-201ENSMUST00000184735 189 ntBASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nr2e3Q9QXZ7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Gm2756-201ENSMUST00000195851 400 ntBASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Nr2e3Q9QXZ7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Gm13365-201ENSMUST00000121188 973 ntBASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr2e3Q9QXZ7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Nr2e3Q9QXZ7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr2e3Q9QXZ7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nr2e3Q9QXZ7 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.71■□□□□ 0.27
Nr2e3Q9QXZ7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr2e3Q9QXZ7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nr2e3Q9QXZ7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms