Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1aQ9QWF0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Chaf1aQ9QWF0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1aQ9QWF0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Carlr-201ENSMUST00000181515 2574 ntBASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Gm4535-201ENSMUST00000182274 558 ntBASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Gm10355-201ENSMUST00000097146 517 ntBASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chaf1aQ9QWF0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chaf1aQ9QWF0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.6■□□□□ 0.25
Chaf1aQ9QWF0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chaf1aQ9QWF0 Gm34391-201ENSMUST00000203706 907 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms