Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trem1Q9JKE2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.3□□□□□ -0.28
Trem1Q9JKE2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.3□□□□□ -0.28
Trem1Q9JKE2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trem1Q9JKE2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Gm7370-201ENSMUST00000219471 767 ntBASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Gm10566-201ENSMUST00000086739 996 ntBASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trem1Q9JKE2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms