Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Gm15372-201ENSMUST00000120729 834 ntBASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Gm6659-201ENSMUST00000174752 547 ntBASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf13bQ9ET35 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf13bQ9ET35 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf13bQ9ET35 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms