Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tubb3Q9ERD7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Gm27702-201ENSMUST00000184512 56 ntBASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tubb3Q9ERD7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Tubb3Q9ERD7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Gm6736-201ENSMUST00000166583 948 ntBASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Gm4899-201ENSMUST00000178708 719 ntBASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tubb3Q9ERD7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms