Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-4Q9EQM3 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.12■□□□□ 0.01
Nkx2-4Q9EQM3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.12■□□□□ 0.01
Nkx2-4Q9EQM3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nkx2-4Q9EQM3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-4Q9EQM3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-4Q9EQM3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-4Q9EQM3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-4Q9EQM3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-4Q9EQM3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.12■□□□□ 0.01
Nkx2-4Q9EQM3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-4Q9EQM3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Nkx2-4Q9EQM3 Celf4-206ENSMUST00000224553 1729 ntBASIC15.12■□□□□ 0.01
Nkx2-4Q9EQM3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nkx2-4Q9EQM3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-4Q9EQM3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Gm12341-201ENSMUST00000119724 503 ntBASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Gm27839-201ENSMUST00000184242 106 ntBASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Gm5356-201ENSMUST00000093326 615 ntBASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Nkx2-4Q9EQM3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Gm12390-201ENSMUST00000117897 397 ntBASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-4Q9EQM3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Gm5354-201ENSMUST00000182417 973 ntBASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.09■□□□□ 0.01
Nkx2-4Q9EQM3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms