Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Gm5177-201ENSMUST00000183092 997 ntBASIC14.85□□□□□ -0.03
Vps35Q9EQH3 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Vps35Q9EQH3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Thap2-203ENSMUST00000218989 527 ntBASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Gm10175-201ENSMUST00000086013 645 ntBASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vps35Q9EQH3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Vps35Q9EQH3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.83□□□□□ -0.03
Vps35Q9EQH3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vps35Q9EQH3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vps35Q9EQH3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vps35Q9EQH3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vps35Q9EQH3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vps35Q9EQH3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Gm17968-201ENSMUST00000194902 784 ntBASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Gm43767-201ENSMUST00000198933 381 ntBASIC14.83□□□□□ -0.04
Vps35Q9EQH3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vps35Q9EQH3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms