Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Gm12134-201ENSMUST00000122109 520 ntBASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Gm8749-201ENSMUST00000117737 331 ntBASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Gm16026-204ENSMUST00000162652 683 ntBASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Gm10154-201ENSMUST00000084445 354 ntBASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp4bQ9D8B3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Gm1401-201ENSMUST00000122048 772 ntBASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Thap2-203ENSMUST00000218989 527 ntBASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp4bQ9D8B3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp4bQ9D8B3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Chmp4bQ9D8B3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp4bQ9D8B3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp4bQ9D8B3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp4bQ9D8B3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp4bQ9D8B3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp4bQ9D8B3 Gm13597-201ENSMUST00000121239 375 ntBASIC18.6■□□□□ 0.57
Chmp4bQ9D8B3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Chmp4bQ9D8B3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.6■□□□□ 0.57
Chmp4bQ9D8B3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp4bQ9D8B3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp4bQ9D8B3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.6■□□□□ 0.57
Chmp4bQ9D8B3 Gm7461-201ENSMUST00000058918 827 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms