Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
U2af1Q9D883 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
U2af1Q9D883 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2af1Q9D883 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2af1Q9D883 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2af1Q9D883 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2af1Q9D883 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC19.47■□□□□ 0.71
U2af1Q9D883 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
U2af1Q9D883 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC19.47■□□□□ 0.71
U2af1Q9D883 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
U2af1Q9D883 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2af1Q9D883 AC131710.1-201ENSMUST00000228336 990 ntBASIC19.47■□□□□ 0.71
U2af1Q9D883 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
U2af1Q9D883 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
U2af1Q9D883 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
U2af1Q9D883 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2af1Q9D883 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2af1Q9D883 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
U2af1Q9D883 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2af1Q9D883 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
U2af1Q9D883 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2af1Q9D883 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2af1Q9D883 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
U2af1Q9D883 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2af1Q9D883 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
U2af1Q9D883 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2af1Q9D883 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
U2af1Q9D883 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
U2af1Q9D883 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2af1Q9D883 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2af1Q9D883 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2af1Q9D883 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
U2af1Q9D883 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
U2af1Q9D883 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
U2af1Q9D883 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 Efs-202ENSMUST00000227037 2540 ntBASIC19.45■□□□□ 0.7
U2af1Q9D883 Gm18737-201ENSMUST00000173594 937 ntBASIC19.45■□□□□ 0.7
U2af1Q9D883 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC19.45■□□□□ 0.7
U2af1Q9D883 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.45■□□□□ 0.7
U2af1Q9D883 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
U2af1Q9D883 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
U2af1Q9D883 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
U2af1Q9D883 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm22065-201ENSMUST00000103753 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm22066-201ENSMUST00000103761 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm24932-201ENSMUST00000103763 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm24115-201ENSMUST00000103799 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm22190-201ENSMUST00000103827 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm22191-201ENSMUST00000103831 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm24721-201ENSMUST00000103849 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm28018-201ENSMUST00000103869 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm26399-201ENSMUST00000103937 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm25349-201ENSMUST00000177728 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm23616-201ENSMUST00000177797 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm25871-201ENSMUST00000177816 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm24752-201ENSMUST00000178240 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm24496-201ENSMUST00000178287 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm25649-201ENSMUST00000178476 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm25548-201ENSMUST00000178681 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm23147-201ENSMUST00000178841 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm26095-201ENSMUST00000179270 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm22171-201ENSMUST00000179283 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm23936-201ENSMUST00000179354 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm22619-201ENSMUST00000179516 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm25255-201ENSMUST00000179579 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm24755-201ENSMUST00000179691 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm26506-201ENSMUST00000179692 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm25086-201ENSMUST00000179931 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm23243-201ENSMUST00000180047 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm24659-201ENSMUST00000180212 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm24169-201ENSMUST00000180244 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm23689-201ENSMUST00000180354 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm27359-201ENSMUST00000184153 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm27785-201ENSMUST00000184268 110 ntBASIC19.44■□□□□ 0.7
U2af1Q9D883 Gm27466-201ENSMUST00000184396 110 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms