Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssr1Q9CY50 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Gm5422-201ENSMUST00000050717 2721 ntBASIC16.11■□□□□ 0.17
Ssr1Q9CY50 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Gm27646-201ENSMUST00000183989 110 ntBASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Gm6296-201ENSMUST00000222599 943 ntBASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Gm43321-201ENSMUST00000198897 2409 ntBASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ssr1Q9CY50 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Ntrk2-208ENSMUST00000225583 2719 ntBASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Gm43677-201ENSMUST00000198098 2378 ntBASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.1■□□□□ 0.17
Ssr1Q9CY50 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ssr1Q9CY50 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ssr1Q9CY50 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.08■□□□□ 0.16
Ssr1Q9CY50 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.08■□□□□ 0.16
Ssr1Q9CY50 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms