Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Smc1aQ9CU62 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1aQ9CU62 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.6■□□□□ 0.25
Smc1aQ9CU62 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1aQ9CU62 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1aQ9CU62 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smc1aQ9CU62 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Smc1aQ9CU62 Efs-202ENSMUST00000227037 2540 ntBASIC16.6■□□□□ 0.25
Smc1aQ9CU62 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1aQ9CU62 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
Smc1aQ9CU62 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.6■□□□□ 0.25
Smc1aQ9CU62 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1aQ9CU62 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc1aQ9CU62 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Chchd1-203ENSMUST00000224633 557 ntBASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc1aQ9CU62 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc1aQ9CU62 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc1aQ9CU62 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc1aQ9CU62 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smc1aQ9CU62 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Gm12134-201ENSMUST00000122109 520 ntBASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc1aQ9CU62 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Gm4899-201ENSMUST00000178708 719 ntBASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Gm27300-201ENSMUST00000184085 97 ntBASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Gm27335-201ENSMUST00000184758 97 ntBASIC16.57■□□□□ 0.24
Smc1aQ9CU62 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smc1aQ9CU62 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms