Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Gm14722-201ENSMUST00000118943 689 ntBASIC12.65□□□□□ -0.38
Smim3Q99PE5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.65□□□□□ -0.38
Smim3Q99PE5 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.65□□□□□ -0.38
Smim3Q99PE5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smim3Q99PE5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.65□□□□□ -0.38
Smim3Q99PE5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim3Q99PE5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.65□□□□□ -0.38
Smim3Q99PE5 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim3Q99PE5 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smim3Q99PE5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.65□□□□□ -0.38
Smim3Q99PE5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim3Q99PE5 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Smim3Q99PE5 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Smim3Q99PE5 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.65□□□□□ -0.38
Smim3Q99PE5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim3Q99PE5 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Smim3Q99PE5 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim3Q99PE5 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim3Q99PE5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim3Q99PE5 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Gm9987-201ENSMUST00000069768 567 ntBASIC12.64□□□□□ -0.39
Smim3Q99PE5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.64□□□□□ -0.39
Smim3Q99PE5 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.64□□□□□ -0.39
Smim3Q99PE5 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim3Q99PE5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.63□□□□□ -0.39
Smim3Q99PE5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.63□□□□□ -0.39
Smim3Q99PE5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Gm5417-201ENSMUST00000079706 384 ntBASIC12.63□□□□□ -0.39
Smim3Q99PE5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.63□□□□□ -0.39
Smim3Q99PE5 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.62□□□□□ -0.39
Smim3Q99PE5 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Smim3Q99PE5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Gm13168-201ENSMUST00000121771 632 ntBASIC12.62□□□□□ -0.39
Smim3Q99PE5 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.62□□□□□ -0.39
Smim3Q99PE5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.62□□□□□ -0.39
Smim3Q99PE5 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms